Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKA11912.1Heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
AKA10695.1
Hemolysin regulation protein AhpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
lapB
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
AKA10886.1
Lsg locus protein 4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.745
AKA12499.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.733
AKA12372.1
4'-phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.726
AKA11446.1
Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.
  
     0.711
AKA12206.1
Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
AKA12585.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
AKA10776.1
Maltose operon protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
AKA10539.1
Opacity-associated protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.691
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
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