Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKA12435.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
AKA12441.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.720
AKA12438.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.687
AKA12446.1
Mu gp16 gemA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.676
AKA11175.1
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
AKA12141.1
Mu-like prophage FluMu protein gp28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.634
AKA12436.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.629
AKA12150.1
Mu-like prophage FluMu protein gp16; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.620
AKA12437.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.598
AKA12459.1
Head morphogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.598
AKA12458.1
Mu bacteriophage protein gp29; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.581
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
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