STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA12437.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (651 aa)    
Predicted Functional Partners:
AKA12438.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.968
AKA12436.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.941
AKA12441.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.936
AKA12158.1
DNA transposition protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.852
AKA12446.1
Mu gp16 gemA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.823
AKA12457.1
Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.805
AKA12456.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.798
AKA12462.1
Head protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.798
AKA12450.1
Mor transcription activator family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.796
AKA12458.1
Mu bacteriophage protein gp29; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.793
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.