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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA12486.1Serine recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)    
Predicted Functional Partners:
noc
RepB plasmid partition; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
AKA12485.1
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.949
AKA11317.1
Bacteriophage replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.806
AKA11278.1
gpO; O protein; structural capsid protein; bacteriophage P2-like virions include a head and a tail; gpO is required for assembly of proheads; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.766
AKA11287.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.766
AKA11304.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.736
AKA11281.1
Phage head protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.709
AKA11277.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.701
AKA11276.1
Portal vertex protein; gpQ; Q protein; structural capsid protein; bacteriophage P2-like virions include a head and a tail; Q is a connector or portal protein that joins phage head and tail; Q, P and M proteins are needed to package DNA into proheads and for the conversion of proheads to capsids; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.700
AKA11288.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.696
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
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