STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA12624.1Nlp family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)    
Predicted Functional Partners:
AKA12446.1
Mu gp16 gemA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.758
AKA12623.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.745
AKA12441.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.744
AKA12458.1
Mu bacteriophage protein gp29; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
AKA12461.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
AKA12464.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.738
AKA12467.1
Tail sheath protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.737
AKA12437.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.735
AKA12473.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
AKA12472.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.717
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.