STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neuA2Spore coat polysaccharide biosynthesis protein SpsG, predicted glycosyltransferase. (352 aa)    
Predicted Functional Partners:
SKA97454.1
Hypothetical protein.
 
     0.898
SKA95683.1
N-acetylneuraminate synthase.
  
 
 0.788
SKA93994.1
Putative Mn2+ efflux pump MntP; Probably functions as a manganese efflux pump.
  
     0.768
SKB03519.1
Hypothetical protein.
  
     0.768
SKA90653.1
Phosphotransferase enzyme family protein.
  
     0.765
ypeB
Spore germination protein.
  
     0.754
spoIIGA
Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase).
  
     0.750
SKA95698.1
N-acylneuraminate cytidylyltransferase.
   
 0.742
SKA88583.1
Stage III sporulation protein AE.
  
     0.738
pphA
Stage II sporulation protein E.
  
     0.714
Your Current Organism:
Sporosarcina newyorkensis
NCBI taxonomy Id: 759851
Other names: CCUG 59649, DSM 23544, LMG 26022, LMG:26022, S. newyorkensis, Sporosarcina newyorkensis Wolfgang et al. 2012, Sporosarcina sp. 3418, Sporosarcina sp. 4331, Sporosarcina sp. 4469, Sporosarcina sp. 4974, Sporosarcina sp. 4984, Sporosarcina sp. 5353, Sporosarcina sp. 57, Sporosarcina sp. 5868, Sporosarcina sp. 6062, Sporosarcina sp. R-31323, strain 6062
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