Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dacAK07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. (412 aa)    
Predicted Functional Partners:
SDSE_1808
K05366 penicillin-binding protein 1A.
 
 
 0.966
ftsI
K00687 penicillin-binding protein 2B.
  
 
 0.963
pbpX
K12556 penicillin-binding protein 2X.
  
 
 0.962
SDSE_0892
D-alanyl-D-alanine serine-type carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 
0.949
pbp2
K12555 penicillin-binding protein 2A.
  
 
 0.949
SDSE_0131
K03693 penicillin-binding protein.
  
 
 0.947
SDSE_1913
K07260 D-alanyl-D-alanine carboxypeptidase.
     
 0.907
pbp7
K01286 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
    
0.664
oppA
Oligopeptide-binding protein aliB Flags: Precursor.
     
 0.651
mccF
Microcin C7 self-immunity protein mccF.
    
 0.541
Your Current Organism:
Streptococcus dysgalactiae
NCBI taxonomy Id: 759913
Other names: S. dysgalactiae subsp. equisimilis AC-2713, Streptococcus dysgalactiae subsp. equisimilis AC-2713, Streptococcus dysgalactiae subsp. equisimilis str. AC-2713, Streptococcus dysgalactiae subsp. equisimilis strain AC-2713
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