Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDSE_0803Predicted membrane protein. (498 aa)    
Predicted Functional Partners:
capF
Capsular polysaccharide biosynthesis protein capF.
 
     0.969
SDSE_0801
K09153 hypothetical protein.
 
     0.925
rgpF
K07272 rhamnosyltransferase.
 
     0.921
SDSE_0800
K00786.
 
     0.904
SDSE_0799
Glycerol phosphate lipoteichoic acid synthase.
 
   
 0.901
SDSE_0797
Glycosyltransferase.
 
     0.830
prgA
Myosin heavy chain, fast skeletal muscle.
  
     0.773
SDSE_0928
Na+ driven multidrug efflux pump.
  
     0.767
SDSE_1487
Hypothetical protein.
  
     0.767
sagD
Streptolysin S biosynthesis protein.
  
     0.764
Your Current Organism:
Streptococcus dysgalactiae
NCBI taxonomy Id: 759913
Other names: S. dysgalactiae subsp. equisimilis AC-2713, Streptococcus dysgalactiae subsp. equisimilis AC-2713, Streptococcus dysgalactiae subsp. equisimilis str. AC-2713, Streptococcus dysgalactiae subsp. equisimilis strain AC-2713
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