Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SDSE_1007Methionine import ATP-binding protein metN. (250 aa)    
Predicted Functional Partners:
bceB
ABC transporter permease protein yxdM.
 
 0.998
bceS
Sensor histidine kinase.
 
 
 0.986
SDSE_1106
Uncharacterized ABC transporter permease MJ0797.
 
 
 0.954
bceR
Probable transcriptional regulator ycf27.
 
   
 0.948
SDSE_0965
Macrolide export ATP-binding/permease protein macB.
 
 0.942
SDSE_0840
Macrolide export ATP-binding/permease protein macB.
 
 0.939
SDSE_2118
Lipid A export ATP-binding/permease protein msbA.
    
0.862
salY-2
ABC transporter permease protein yxdM.
  
 
 0.805
ecsA
Spermidine/putrescine import ATP-binding protein potA.
   
0.800
nsr
Nisin-resistance protein.
     
 0.790
Your Current Organism:
Streptococcus dysgalactiae
NCBI taxonomy Id: 759913
Other names: S. dysgalactiae subsp. equisimilis AC-2713, Streptococcus dysgalactiae subsp. equisimilis AC-2713, Streptococcus dysgalactiae subsp. equisimilis str. AC-2713, Streptococcus dysgalactiae subsp. equisimilis strain AC-2713
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