STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDSE_1816Inner membrane amino-acid ABC transporter permease protein yecS. (267 aa)    
Predicted Functional Partners:
SDSE_1815
K02028 polar amino acid transport system ATP-binding protein.
 
 0.986
SDSE_0786
Membrane-bound lytic murein transglycosylase F.
 0.968
atmA
Membrane-bound lytic murein transglycosylase F.
 0.962
SDSE_1817
Membrane-bound lytic murein transglycosylase F.
 0.941
glnQ-2
K02028 polar amino acid transport system ATP-binding protein.
 0.927
artP
K02028 polar amino acid transport system ATP-binding protein.
 0.927
glnQ
K10041 putative glutamine transport system ATP-binding protein.
 0.926
SDSE_0354
K02028 polar amino acid transport system ATP-binding protein.
 0.925
SDSE_1153
Membrane-bound lytic murein transglycosylase F; Belongs to the bacterial solute-binding protein 3 family.
 0.917
SDSE_1123
Membrane-bound lytic murein transglycosylase F.
 0.889
Your Current Organism:
Streptococcus dysgalactiae
NCBI taxonomy Id: 759913
Other names: S. dysgalactiae subsp. equisimilis AC-2713, Streptococcus dysgalactiae subsp. equisimilis AC-2713, Streptococcus dysgalactiae subsp. equisimilis str. AC-2713, Streptococcus dysgalactiae subsp. equisimilis strain AC-2713
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.