Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
oppCOligopeptide transport system permease protein oppC. (343 aa)    
Predicted Functional Partners:
oppF-2
Oligopeptide transport ATP-binding protein oppF; Belongs to the ABC transporter superfamily.
 0.999
oppD-2
Oligopeptide transport ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
 0.999
oppB-2
Putative oligopeptide transport system permease protein oppB2.
 0.999
oppD
Oligopeptide transport ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
 0.998
oppF
Oligopeptide transport ATP-binding protein amiF; Belongs to the ABC transporter superfamily.
 0.997
oppB
Oligopeptide transport system permease protein amiC.
 
 0.996
oppA-2
Periplasmic oligopeptide-binding protein Flags: Precursor.
 
 
 0.994
oppA
Oligopeptide-binding protein aliB Flags: Precursor.
 
 
 0.980
dppB
Putative peptide permease protein BOV_A0351.
 
 0.942
dppC
Dipeptide transport system permease protein dppC.
  
  
 
0.921
Your Current Organism:
Streptococcus dysgalactiae
NCBI taxonomy Id: 759913
Other names: S. dysgalactiae subsp. equisimilis AC-2713, Streptococcus dysgalactiae subsp. equisimilis AC-2713, Streptococcus dysgalactiae subsp. equisimilis str. AC-2713, Streptococcus dysgalactiae subsp. equisimilis strain AC-2713
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