STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK32266.1Putative Excinuclease ABC, C subunit, N-terminal YazA. (111 aa)    
Predicted Functional Partners:
spsF
Spore coat polysaccharide biosynthesis protein F (spsF).
       0.778
truB
Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.728
ADK32263.1
Hypothetical protein.
       0.639
ADK32267.1
Alpha-2-macroglobulin domain protein.
       0.503
ADK32262.1
Hypothetical protein.
       0.459
ADK31976.1
Hypothetical protein.
 
     0.434
ADK31163.1
Tetrapyrrole (corrin/porphyrin) methylase.
  
  
 0.404
rsmI
Tetrapyrrole methyltransferase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.404
Your Current Organism:
Brachyspira pilosicoli
NCBI taxonomy Id: 759914
Other names: B. pilosicoli 95/1000, Brachyspira pilosicoli 95/1000
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