Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AEC01342.1Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: pmu:PM0154 ribose ABC transporter permease protein; PFAM: ABC transporter permease; SPTR: RbsC; IMG reference gene:2503956364; PFAM: Branched-chain amino acid transport system / permease component. (335 aa)    
Predicted Functional Partners:
AEC01340.1
COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dtu:Dtur_1644 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503956362; PFAM: ABC transporter.
 
  
  0.973
AEC01257.1
COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: csh:Closa_1201 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503956279; PFAM: ABC transporter.
 
  0.945
AEC01323.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_1663 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Ribose import ATP-binding protein RbsA; IMG reference gene:2503956345; PFAM: ABC transporter.
 
  0.945
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.941
AEC02844.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cpy:Cphy_2010 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; IMG reference gene:2503957960; PFAM: ABC transporter.
 
  0.932
AEC03011.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_0706 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503958129; PFAM: ABC transporter.
 
  0.923
AEC01339.1
Bifunctional carbohydrate binding and transport protein; COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: pin:Ping_2790 bifunctional carbohydrate binding and transport protein; SPTR: Bifunctional carbohydrate binding and transport protein; IMG reference gene:2503956361.
 
   0.886
AEC02825.1
COGs: COG1129 ABC-type sugar transport system ATPase component; KEGG: ssm:Spirs_2647 monosaccharide-transporting ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503957940.
 
  0.880
AEC01320.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: ssm:Spirs_1666 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: D-ribose-binding periplasmic protein; IMG reference gene:2503956342; PFAM: family.
   0.832
AEC02260.1
Sugar ABC transporter (sugar-binding protein); COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: gka:GK1896 sugar ABC transporter (sugar-binding protein); SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503957345; PFAM: family.
 
   0.829
Your Current Organism:
Sphaerochaeta coccoides
NCBI taxonomy Id: 760011
Other names: S. coccoides DSM 17374, Sphaerochaeta coccoides DSM 17374, Sphaerochaeta coccoides str. DSM 17374, Sphaerochaeta coccoides strain DSM 17374, Spirochaeta coccoides DSM 17374, Spirochaeta coccoides SPN1, Spirochaeta sp. SPN1
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