Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFL67345.1PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit. (400 aa)    
Predicted Functional Partners:
AFL67346.1
ABC-type proline/glycine betaine transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.999
AFL67347.1
ABC-type proline/glycine betaine transport system, periplasmic component; PFAM: Substrate binding domain of ABC-type glycine betaine transport system.
 
 0.999
AFL68923.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
 
     
0.877
AFL68242.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
 
     
0.866
AFL69018.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; PFAM: ABC transporter.
 
     
0.796
ung
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.433
AFL67344.1
A/G-specific DNA-adenine glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase.
       0.433
Your Current Organism:
Sulfurospirillum barnesii
NCBI taxonomy Id: 760154
Other names: S. barnesii SES-3, Sulfurospirillum barnesii SES-3, Sulfurospirillum barnesii str. SES-3, Sulfurospirillum barnesii strain SES-3
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