Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AFL69281.1PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. (776 aa)    
Predicted Functional Partners:
AFL69282.1
Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
 
 
 0.951
AFL69285.1
Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
 
 
 0.939
AFL69279.1
Hypothetical protein.
 
  
 0.784
AFL68925.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
  
 0.748
AFL69283.1
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.734
AFL68819.1
Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
  
 0.694
AFL69280.1
Hypothetical protein.
       0.627
AFL68915.1
Putative iron-regulated membrane protein.
 
  
 0.624
AFL68896.1
Hypothetical protein.
 
  
 0.618
AFL69278.1
Hypothetical protein.
 
    0.601
Your Current Organism:
Sulfurospirillum barnesii
NCBI taxonomy Id: 760154
Other names: S. barnesii SES-3, Sulfurospirillum barnesii SES-3, Sulfurospirillum barnesii str. SES-3, Sulfurospirillum barnesii strain SES-3
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