STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE47924.1COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR003468:IPR004677; KEGG: mtt:Ftrac_1616 cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome c oxidase, cbb3-type; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monohaem subunit/FixO; IMG reference gene:2504769359; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; [...] (710 aa)    
Predicted Functional Partners:
AEE47922.1
InterPro IPR003088; KEGG: fbc:FB2170_03705 cytochrome-c oxidase FixP chain; PFAM: Cytochrome c, class I; SPTR: Cytochrome-c oxidase fixP chain; IMG reference gene:2504769357; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III.
 
 0.999
AEE52699.1
InterPro IPR003088; KEGG: cpi:Cpin_0529 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I; IMG reference gene:2504774264; PFAM: Class III cytochrome C family; Cytochrome c.
 
 
 0.984
AEE47921.1
Cytochrome c oxidase accessory protein CcoG; COGs: COG0348 Polyferredoxin; InterPro IPR001450:IPR014116; KEGG: chu:CHU_1141 ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Cytochrome c oxidase accessory protein CcoG; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; IMG reference gene:2504769356; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG.
 
  
 0.976
AEE52260.1
Rhodanese-like protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR003088:IPR001763; KEGG: tbd:Tbd_2545 putative cytochrome c; PFAM: Rhodanese-like; Cytochrome c, class I; SMART: Rhodanese-like; SPTR: Putative uncharacterized protein; IMG reference gene:2504773804; PFAM: Cytochrome c; Rhodanese-like domain.
 
 
 0.972
AEE48107.1
Cytochrome c class I; InterPro IPR003088; KEGG: sli:Slin_1300 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I; IMG reference gene:2504769546; PFAM: Cytochrome c.
 
 
 0.970
AEE49090.1
KEGG: dfe:Dfer_1198 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770554; PFAM: Cytochrome c.
 
 
 0.970
AEE52702.1
KEGG: cpi:Cpin_0526 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774267; PFAM: Protein of unknown function (DUF3341).
 
 
 0.969
AEE52703.1
Cytochrome c class I; InterPro IPR003088; KEGG: zpr:ZPR_0581 hypothetical protein; PFAM: Cytochrome c, class I; SPTR: Putative uncharacterized protein; IMG reference gene:2504774268; PFAM: Cytochrome c.
 
 
 0.968
AEE54173.1
Membrane-bound dehydrogenase domain protein; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR013428:IPR013427; KEGG: dfe:Dfer_3060 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: Putative membrane-bound dehydrogenase; Putative haem-binding region; IMG reference gene:2504775762; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
 
 0.965
AEE48120.1
InterPro IPR013428; KEGG: sli:Slin_3985 membrane-bound dehydrogenase domain protein; SPTR: Probable Cytochrome c subunit of Cbb3 type cytochrome oxidase; TIGRFAM: Putative membrane-bound dehydrogenase; IMG reference gene:2504769559; PFAM: Cytochrome c.
  
 
 0.964
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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