Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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AEE47996.1COGs: COG2272 Carboxylesterase type B; InterPro IPR002018; KEGG: cse:Cseg_2440 carboxylesterase; PFAM: Carboxylesterase, type B; PRIAM: Carboxylesterase; SPTR: Putative carboxylesterase; IMG reference gene:2504769433; PFAM: Carboxylesterase; Belongs to the type-B carboxylesterase/lipase family. (616 aa)    
Predicted Functional Partners:
AEE47997.1
Hypothetical protein; IMG reference gene:2504769434.
       0.462
AEE47998.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: mtt:Ftrac_1351 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504769435; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
       0.462
AEE47995.1
Small GTP-binding protein; COGs: COG4886 Leucine-rich repeat (LRR) protein; InterProIPR003591:IPR003579:IPR000157:IPR001611:IPR 013684:IPR005225; KEGG: npu:Npun_F6039 Miro domain-containing protein; PFAM: MIRO-like; Leucine-rich repeat; SMART: Ras small GTPase, Rab type; Leucine-rich repeat, typical subtype; Toll-Interleukin receptor; SPTR: Miro domain protein; TIGRFAM: Small GTP-binding protein; IMG reference gene:2504769432; PFAM: Leucine Rich Repeat; Ras family.
       0.450
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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