Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48041.1KEGG: sli:Slin_0423 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769480; PFAM: Protein of unknown function (DUF2846). (131 aa)    
Predicted Functional Partners:
AEE48042.1
KEGG: sli:Slin_0424 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769481.
       0.795
AEE48039.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: sli:Slin_0421 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family; IMG reference gene:2504769478; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
       0.773
AEE48040.1
Putative signal transduction histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: sli:Slin_0422 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS; IMG reference gene:2504769479; PFAM: Histidine kinase.
       0.773
AEE48043.1
KEGG: mtt:Ftrac_1450 phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; IMG reference gene:2504769482; PFAM: Acyltransferase.
       0.477
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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