Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AEE48053.1KEGG: ppn:Palpr_1115 hypothetical protein; SPTR: Putative outer membrane protein; IMG reference gene:2504769492. (286 aa)    
Predicted Functional Partners:
AEE48052.1
Protein of unknown function DUF1648; InterPro IPR012867; KEGG: mtt:Ftrac_3142 hypothetical protein; PFAM: Protein of unknown function DUF1648; SPTR: Putative uncharacterized protein; IMG reference gene:2504769491; PFAM: Protein of unknown function (DUF1648).
       0.648
AEE48051.1
Hypothetical protein; IMG reference gene:2504769490.
       0.572
AEE48054.1
Fatty acid hydroxylase; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fjo:Fjoh_3509 sterol desaturase-like protein; PFAM: Fatty acid hydroxylase; SPTR: Sterol desaturase-like protein; IMG reference gene:2504769493; PFAM: Fatty acid hydroxylase superfamily.
       0.553
AEE51153.1
InterPro IPR012944; KEGG: sli:Slin_2626 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772674; PFAM: SusD family.
  
 
   0.423
AEE48325.1
KEGG: sli:Slin_2828 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769769.
  
     0.400
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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