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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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miaB(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (481 aa)    
Predicted Functional Partners:
AEE48060.1
KEGG: coc:Coch_0313 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769499.
  
    0.791
AEE48059.1
Sigma54 specific transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR003593:IPR002078:IPR002197; KEGG: cpi:Cpin_5917 sigma54 specific transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Sigma54 specific transcriptional regulator, Fis family; IMG reference gene:2504769498; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.
       0.777
rlmN
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
 
  
 0.751
AEE50473.1
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.674
AEE48061.1
COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: aca:ACP_2163 ATPase, AAA family; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: ATPase, AAA family; IMG reference gene:2504769500; PFAM: Divergent AAA domain.
       0.672
AEE48062.1
Phage-related regulatory protein CII; COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: cja:CJA_1579 phage-related regulatory protein CII; SPTR: Phage-related regulatory protein cII; IMG reference gene:2504769501; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
       0.672
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
 
  
 0.655
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
 
  
 0.633
AEE48063.1
InterPro IPR000182; KEGG: rlg:Rleg_2038 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; IMG reference gene:2504769502; PFAM: Acetyltransferase (GNAT) family.
  
    0.578
AEE54320.1
ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
   
 0.508
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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