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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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AEE48059.1Sigma54 specific transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR003593:IPR002078:IPR002197; KEGG: cpi:Cpin_5917 sigma54 specific transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Sigma54 specific transcriptional regulator, Fis family; IMG reference gene:2504769498; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (463 aa)    
Predicted Functional Partners:
AEE49507.1
COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: dfe:Dfer_2750 RNA polymerase, sigma 54 subunit, RpoN; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; SPTR: RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma factor 54; IMG reference gene:2504770977; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor.
 
   
 0.828
AEE50459.1
COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: cpi:Cpin_0852 RNA polymerase, sigma 54 subunit, RpoN; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; SPTR: RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma factor 54; manually curated; IMG reference gene:2504771960; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor.
 
   
 0.828
AEE48060.1
KEGG: coc:Coch_0313 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769499.
       0.811
miaB
(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.777
AEE52899.1
Signal transduction histidine kinase with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.747
AEE48062.1
Phage-related regulatory protein CII; COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: cja:CJA_1579 phage-related regulatory protein CII; SPTR: Phage-related regulatory protein cII; IMG reference gene:2504769501; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
    0.711
AEE48061.1
COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: aca:ACP_2163 ATPase, AAA family; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: ATPase, AAA family; IMG reference gene:2504769500; PFAM: Divergent AAA domain.
       0.709
AEE49504.1
COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterProIPR000014:IPR001789:IPR003661:IPR003594:IPR 013767; KEGG: dfe:Dfer_2748 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor regio [...]
 
 
 0.624
AEE53006.1
Sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family; COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterProIPR013767:IPR002078:IPR002197:IPR000014:IPR 003593; KEGG: gme:Gmet_2109 Fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; PAS; SPTR: Transcriptional regulator, Fis family / DNA-binding protein Fis; TIGRFAM: PAS; IMG reference gene:2504774578; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 int [...]
 
 
 
0.608
AEE48063.1
InterPro IPR000182; KEGG: rlg:Rleg_2038 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; IMG reference gene:2504769502; PFAM: Acetyltransferase (GNAT) family.
       0.603
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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