Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48081.1Bile acid:sodium symporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: na+-dependent transporter-like protein; PFAM: Bile acid:sodium symporter; SPTR: Possible lipoprotein transmembrane protein; IMG reference gene:2504769520; PFAM: Sodium Bile acid symporter family. (322 aa)    
Predicted Functional Partners:
AEE48082.1
InterPro IPR002860; KEGG: sli:Slin_1570 glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR repeat; SPTR: Putative glycosyl hydrolase, BNR repeat; IMG reference gene:2504769521; PFAM: BNR/Asp-box repeat.
       0.773
AEE48080.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: cpi:Cpin_3971 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; IMG reference gene:2504769519; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
  
   0.573
AEE48084.1
D-lactate dehydrogenase (cytochrome); COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113; KEGG: rpc:RPC_2091 FAD linked oxidase-like; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase-like; IMG reference gene:2504769523; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain.
       0.482
AEE48083.1
Uncharacterized protein family UPF0324; COGs: COG2855 membrane protein; InterPro IPR018383; KEGG: fjo:Fjoh_4651 hypothetical protein; PFAM: Uncharacterised protein family UPF0324, prokaryote; SPTR: Probable membrane protein; IMG reference gene:2504769522; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein.
       0.481
AEE48079.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cpi:Cpin_3371 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; IMG reference gene:2504769518; PFAM: Predicted permease.
 
    0.421
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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