Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
AEE48110.1KEGG: sli:Slin_2263 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769549. (222 aa)    
Predicted Functional Partners:
AEE48111.1
COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022; KEGG: lby:Lbys_1917 carboxyl transferase; PFAM: Carboxyl transferase; PRIAM: Propionyl-CoA carboxylase; SPTR: Carboxyl transferase; IMG reference gene:2504769550; PFAM: Carboxyl transferase domain.
       0.470
AEE48109.1
COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: phe:Phep_1191 class I peptide chain release factor; PFAM: Class I peptide chain release factor; SPTR: Class I peptide chain release factor; IMG reference gene:2504769548; PFAM: RF-1 domain.
       0.464
AEE48108.1
Protein of unknown function DUF399; COGs: COG3016 Uncharacterized iron-regulated protein; InterPro IPR007314; KEGG: sli:Slin_6096 protein of unknown function DUF399; PFAM: Protein of unknown function DUF399; SPTR: Putative uncharacterized protein; IMG reference gene:2504769547; PFAM: Protein of unknown function, DUF399.
       0.401
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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