STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE48243.1InterPro IPR003400; KEGG: phe:Phep_4089 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Outer membrane transport energization protein ExbD; IMG reference gene:2504769686; PFAM: Biopolymer transport protein ExbD/TolR. (220 aa)    
Predicted Functional Partners:
AEE48242.1
MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: phe:Phep_4090 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Outer membrane transport energization protein ExbB; IMG reference gene:2504769685; PFAM: MotA/TolQ/ExbB proton channel family.
 
 
 0.972
AEE48245.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.923
AEE48244.1
InterPro IPR003400; KEGG: fps:FP2208 biopolymer transport ExbD protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport ExbD protein; IMG reference gene:2504769687; PFAM: Biopolymer transport protein ExbD/TolR.
 
     0.919
AEE48247.1
COGs: COG0226 ABC-type phosphate transport system periplasmic component; KEGG: bth:BT_2664 putative phosphate ABC transporter, phosphate-binding component; SPTR: Putative uncharacterized protein; IMG reference gene:2504769690.
 
    0.859
AEE48248.1
InterPro IPR001440:IPR019734; KEGG: chu:CHU_2012 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat-containing protein; IMG reference gene:2504769691.
 
     0.813
AEE50025.1
TonB family protein; InterPro IPR006260:IPR003538; KEGG: cpi:Cpin_1429 TonB family protein; PFAM: Gram-negative bacterial tonB protein; SPTR: TonB family protein; TIGRFAM: TonB, C-terminal; IMG reference gene:2504771507; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
 
 0.798
AEE53582.1
InterPro IPR003400; KEGG: fps:FP2208 biopolymer transport ExbD protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport ExbD protein; IMG reference gene:2504775157; PFAM: Biopolymer transport protein ExbD/TolR.
 
     0.789
AEE53199.1
MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: rbi:RB2501_09380 putative biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Putative biopolymer transport protein; IMG reference gene:2504774772; PFAM: MotA/TolQ/ExbB proton channel family.
  
 
 0.734
nuoI
NAD(P)H-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
 
     0.541
AEE51095.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.527
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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