Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48254.1TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: sli:Slin_0274 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor; IMG reference gene:2504769697; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family. (1077 aa)    
Predicted Functional Partners:
AEE48255.1
InterPro IPR012944; KEGG: dfe:Dfer_4947 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504769698; PFAM: SusD family.
 
 
   0.927
AEE51366.1
InterPro IPR012944; KEGG: sli:Slin_2992 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772892; PFAM: SusD family.
  
 
   0.810
AEE53661.1
InterPro IPR012944; KEGG: sli:Slin_4041 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504775236; PFAM: SusD family.
 
 
   0.766
AEE53693.1
InterPro IPR012944; KEGG: sli:Slin_0440 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504775268; PFAM: SusD family.
 
 
   0.758
AEE48559.1
InterPro IPR012944; KEGG: lby:Lbys_2780 ragb/susd domain protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein probably involved in nutrient binding; IMG reference gene:2504770007; PFAM: SusD family.
  
 
   0.753
AEE52636.1
InterPro IPR012944; KEGG: cpi:Cpin_0455 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774196; PFAM: SusD family.
 
 
   0.728
AEE52499.1
InterPro IPR012944; KEGG: dfe:Dfer_1619 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774056; PFAM: SusD family.
 
 
   0.724
AEE49700.1
InterPro IPR012944; KEGG: dfe:Dfer_2522 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504771176; PFAM: SusD family.
 
 
   0.715
AEE52403.1
InterPro IPR012944; KEGG: sli:Slin_4207 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504773951; PFAM: SusD family.
 
 
   0.663
AEE49017.1
InterPro IPR012944; KEGG: sli:Slin_6054 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504770480; PFAM: SusD family.
 
 
   0.656
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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