Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE48307.1Regulatory protein MarR; InterPro IPR000835; KEGG: sli:Slin_2146 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; IMG reference gene:2504769751. (220 aa)    
Predicted Functional Partners:
AEE48308.1
Hypothetical protein; IMG reference gene:2504769752.
       0.560
AEE51352.1
KEGG: dfe:Dfer_3667 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772878.
  
     0.536
AEE53869.1
KEGG: sli:Slin_5342 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775448.
  
     0.519
AEE48309.1
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: dfe:Dfer_1175 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2504769753; PFAM: Major Facilitator Superfamily.
     
 0.429
AEE49957.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: chu:CHU_2646 ABC transporter, permease component; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC transporter, permease component; IMG reference gene:2504771439; PFAM: Predicted permease.
  
     0.413
AEE50710.1
KEGG: phe:Phep_0729 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772218.
 
     0.408
AEE48340.1
KEGG: mxa:MXAN_6633 hypothetical protein; SPTR: Putative membrane protein; IMG reference gene:2504769785.
  
     0.402
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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