STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE48359.1COGs: COG0438 Glycosyltransferase; KEGG: ppn:Palpr_1324 glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1; IMG reference gene:2504769805. (439 aa)    
Predicted Functional Partners:
AEE48360.1
KEGG: chu:CHU_0500 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769806.
       0.642
AEE48153.1
Alpha amylase catalytic region; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589:IPR004193:IPR006047; KEGG: rmr:Rmar_0285 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha amylase catalytic region; IMG reference gene:2504769592; PFAM: Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family.
  
 0.471
AEE49209.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: chu:CHU_1927 sugar transferase; PFAM: Bacterial sugar transferase; SPTR: Bacterial sugar transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; IMG reference gene:2504770675; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.465
AEE48362.1
COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR011840:IPR004193:IPR006047:IPR006589; KEGG: ppn:Palpr_0849 pullulanase, type II; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Pullulanase, type I; TIGRFAM: Pullulanase, type I; IMG reference gene:2504769808; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: pullulanase, type I.
  
  
 0.457
AEE51261.1
COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: sli:Slin_4071 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; IMG reference gene:2504772785; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.454
AEE48361.1
Hypothetical protein; IMG reference gene:2504769807.
       0.443
AEE50122.1
Glycosyl hydrolase BNR repeat-containing protein; InterPro IPR002860; KEGG: aca:ACP_1356 BNR/Asp-box repeat protein; PFAM: BNR repeat; SPTR: BNR/Asp-box repeat protein; IMG reference gene:2504771608; PFAM: BNR/Asp-box repeat.
  
     0.407
AEE51197.1
GHMP kinase domain protein; COGs: COG1577 Mevalonate kinase; InterPro IPR013750; KEGG: fbc:FB2170_08219 hypothetical protein; PFAM: GHMP kinase, C-terminal; SPTR: Putative mevalonate kinase; IMG reference gene:2504772718; PFAM: GHMP kinases N terminal domain.
  
     0.404
AEE52030.1
KEGG: rbi:RB2501_08855 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773570.
  
     0.401
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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