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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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gene co-occurrence
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[Homology]
Score
AEE48384.1KEGG: mba:Mbar_A0306 hypothetical protein; SPTR: Crispr-associated cxxc_cxxc protein Cst1; IMG reference gene:2504769830. (475 aa)    
Predicted Functional Partners:
AEE48387.1
CRISPR-associated helicase Cas3; COGs: COG1203 helicase; InterProIPR006483:IPR006474:IPR011545:IPR001650:IPR 014001; KEGG: mba:Mbar_A0309 hypothetical protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: Dead/deah box helicase, fused to N-terminal hd domain; TIGRFAM: Helicase Cas3, CRISPR-associated, core; CRISPR-associated HD domain; IMG reference gene:2504769833; PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD.
     
 0.783
AEE48385.1
CRISPR-associated autoregulator, DevR family; COGs: COG1857 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR010154:IPR013414; KEGG: msi:Msm_0168 putative DNA repair protein; SPTR: Crispr-associated regulatory protein, devr family; TIGRFAM: CRISPR-associated regulatory DevR; CRISPR-associated negative autoregulator; IMG reference gene:2504769831; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP.
     
 0.764
AEE48386.1
CRISPR-associated protein Cas5 family; COGs: COG1688 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013337:IPR013422; KEGG: mba:Mbar_A0308 hypothetical protein; SPTR: CRISPR-associated protein Cas5, Tneap subtype; TIGRFAM: CRISPR-associated protein Cas5, Tneap type; CRISPR-associated protein Cas5; IMG reference gene:2504769832; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/TNEAP; CRISPR-associated protein Cas5, N-terminal domain.
     
 0.764
AEE48388.1
CRISPR-associated protein Cas4; COGs: COG1468 RecB family exonuclease; InterPro IPR013343; KEGG: pgn:PGN_1961 CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4; SPTR: CRISPR-associated exonuclease, Cas4 family; TIGRFAM: CRISPR-associated protein Cas4; IMG reference gene:2504769834; PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4.
     
 0.750
AEE48383.1
CRISPR-associated protein Cas6; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).
     
 0.723
cas1
CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
     
 0.607
cas2
CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
     
 0.494
AEE48382.1
Hypothetical protein; COGs: COG2378 transcriptional regulator protein; KEGG: cpi:Cpin_1199 putative transcriptional regulator protein; SPTR: Putative transcriptional regulator protein; IMG reference gene:2504769828.
       0.464
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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