Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48414.1HipA domain protein; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894:IPR012893; KEGG: aca:ACP_1546 HipA family protein; PFAM: HipA-like, C-terminal; HipA-like, N-terminal; SPTR: HipA family protein; IMG reference gene:2504769860; PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain. (406 aa)    
Predicted Functional Partners:
AEE48413.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: sun:SUN_1612 transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator; IMG reference gene:2504769859; PFAM: Helix-turn-helix.
 
  
 0.949
AEE49528.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: cpi:Cpin_2058 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; IMG reference gene:2504770999; PFAM: Helix-turn-helix.
 
 
 
 0.749
AEE49734.1
HipA domain protein; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894:IPR012893; KEGG: HipA domain protein; PFAM: HipA-like, N-terminal; HipA-like, C-terminal; SPTR: HipA-like protein; IMG reference gene:2504771210; PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain.
  
     0.513
AEE48415.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107:IPR002104; KEGG: ran:Riean_0325 integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Integrase family protein; IMG reference gene:2504769861; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
       0.490
AEE48412.1
KEGG: bbe:BBR47_58550 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769858.
       0.458
AEE48416.1
COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: cpi:Cpin_0936 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-strand binding protein; TIGRFAM: Single-strand DNA-binding; IMG reference gene:2504769862; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
       0.448
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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