Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AEE48450.1Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: dfe:Dfer_0769 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; IMG reference gene:2504769896; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (291 aa)    
Predicted Functional Partners:
AEE48451.1
Cupin 2 conserved barrel domain protein; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: dfe:Dfer_0768 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein; IMG reference gene:2504769897; PFAM: Cupin domain.
 
   0.627
AEE48449.1
Hypothetical protein; KEGG: lbf:LBF_0121 dihydrofolate reductase; SPTR: Bifunctional deaminase-reductase domain protein; IMG reference gene:2504769895.
       0.491
AEE51922.1
KEGG: gfo:GFO_1076 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773460.
  
     0.459
AEE48448.1
KEGG: bge:BC1002_1238 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769894; PFAM: Calcium/calmodulin dependent protein kinase II Association.
       0.423
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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