Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48461.1Ethyl tert-butyl ether degradation EthD; InterPro IPR009799; KEGG: fbc:FB2170_11056 hypothetical protein; PFAM: Ethyl tert-butyl ether degradation EthD; SPTR: Putative uncharacterized protein; TIGRFAM: Ethyl tert-butyl ether degradation EthD; IMG reference gene:2504769907; PFAM: EthD protein; TIGRFAM: conserved hypothetical protein. (143 aa)    
Predicted Functional Partners:
AEE48462.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fjo:Fjoh_4826 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: AraC family transcriptional regulator; IMG reference gene:2504769908; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
       0.608
AEE50449.1
KEGG: fbc:FB2170_08854 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771950; PFAM: Protein of unknown function (DUF664).
  
     0.607
AEE51577.1
KEGG: sli:Slin_2415 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773106.
  
     0.590
AEE51575.1
InterPro IPR012944; KEGG: dfe:Dfer_2603 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504773104; PFAM: SusD family.
  
     0.574
AEE52776.1
DoxX family protein; InterPro IPR011637; KEGG: sli:Slin_0983 DoxX family protein; PFAM: DoxX; SPTR: DoxX family protein; IMG reference gene:2504774343; PFAM: DoxX.
  
     0.540
AEE48460.1
COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR001789; KEGG: lby:Lbys_2754 transcriptional regulator, crp/fnr family; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Transcriptional regulator, Crp/Fnr family; IMG reference gene:2504769906; PFAM: Response regulator receiver domain.
       0.522
AEE51580.1
InterPro IPR003953; KEGG: sli:Slin_2420 hypothetical protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Putative uncharacterized protein; IMG reference gene:2504773109; PFAM: FAD binding domain.
  
     0.519
AEE48464.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: zpr:ZPR_2874 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short chain dehydrogenase; IMG reference gene:2504769910; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.498
AEE48463.1
Protein of unknown function DUF2141; COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: tde:TDE1661 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: Putative uncharacterized protein; IMG reference gene:2504769909; PFAM: Uncharacterized protein conserved in bacteria (DUF2141).
       0.457
AEE49301.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104:IPR006311; KEGG: pdi:BDI_1870 putative dehydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Putative dehydrogenase; IMG reference gene:2504770767; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.437
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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