Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
AEE48506.1KEGG: sli:Slin_1319 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769953. (108 aa)    
Predicted Functional Partners:
AEE48505.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_1318 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504769952; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
 
     0.922
AEE48504.1
InterPro IPR000182; KEGG: gcn5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase (GNAT) family protein; IMG reference gene:2504769951; PFAM: Acetyltransferase (GNAT) family.
       0.515
AEE51609.1
KEGG: sli:Slin_4715 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773138; PFAM: Alginate lyase.
  
     0.464
AEE48507.1
Hypothetical protein; IMG reference gene:2504769954.
       0.425
AEE48809.1
Fatty acid desaturase; InterPro IPR005804; KEGG: sli:Slin_6631 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase; IMG reference gene:2504770268; PFAM: Fatty acid desaturase.
  
     0.423
AEE48508.1
Heat shock protein Hsp20; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: sli:Slin_2027 heat shock protein HSP20; PFAM: Heat shock protein Hsp20; SPTR: Possible heat shock protein Hsp20; IMG reference gene:2504769955; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
 
     0.420
AEE54076.1
InterPro IPR001087; KEGG: sli:Slin_3845 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family; IMG reference gene:2504775663; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.413
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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