Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEE48509.1AAA ATPase; InterPro IPR003593; KEGG: vpa:VPA0800 hypothetical protein; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; IMG reference gene:2504769956. (408 aa)    
Predicted Functional Partners:
AEE48510.1
KEGG: spl:Spea_4172 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769957.
       0.790
AEE52804.1
KEGG: sli:Slin_2878 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774371.
  
     0.503
AEE48202.1
InterPro IPR008592:IPR010106; KEGG: cts:Ctha_2218 hypothetical protein; PFAM: Protein of unknown function DUF874, Helicobacter pylori; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP01784; IMG reference gene:2504769645; PFAM: Helicobacter pylori protein of unknown function (DUF874); TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.472
AEE51570.1
Response regulator receiver; InterPro IPR001789; PFAM: Signal transduction response regulator, receiver region; SPTR: Predicted protein; IMG reference gene:2504773099; PFAM: Response regulator receiver domain.
  
     0.460
AEE48508.1
Heat shock protein Hsp20; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: sli:Slin_2027 heat shock protein HSP20; PFAM: Heat shock protein Hsp20; SPTR: Possible heat shock protein Hsp20; IMG reference gene:2504769955; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
       0.448
AEE53915.1
KEGG: amt:Amet_0851 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775495; TIGRFAM: TIGR02646 family protein.
 
     0.441
AEE54247.1
KEGG: sli:Slin_3815 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775837.
  
     0.409
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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