Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48525.1KEGG: cpi:Cpin_1549 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769972; PFAM: Protein of unknown function (DUF2809). (122 aa)    
Predicted Functional Partners:
AEE48524.1
KEGG: cpi:Cpin_6023 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769971.
       0.752
AEE48523.1
COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase; InterPro IPR000262; KEGG: rxy:Rxyl_1052 lactate 2-monooxygenase; PFAM: FMN-dependent dehydrogenase; PRIAM: Lactate 2-monooxygenase; SPTR: Lactate 2-monooxygenase; IMG reference gene:2504769970; PFAM: FMN-dependent dehydrogenase.
       0.622
AEE48522.1
InterPro IPR019619; KEGG: sli:Slin_0467 protein of unknown function DUF2490; PFAM: Protein of unknown function DUF2490; SPTR: Putative uncharacterized protein; IMG reference gene:2504769969; PFAM: Protein of unknown function (DUF2490).
 
     0.519
AEE48769.1
KEGG: fjo:Fjoh_0240 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770224.
 
     0.488
AEE50681.1
Protein of unknown function DUF1361; COGs: COG4330 membrane protein; InterPro IPR009793; KEGG: tde:TDE2227 hypothetical protein; PFAM: Protein of unknown function DUF1361; SPTR: Putative uncharacterized protein; IMG reference gene:2504772187; PFAM: Protein of unknown function (DUF1361).
 
     0.406
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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