Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48549.1KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769996. (359 aa)    
Predicted Functional Partners:
AEE51191.1
KEGG: cyn:Cyan7425_2428 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772712.
   
 0.922
AEE48548.1
ArsC family protein; COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660:IPR006504; KEGG: vap:Vapar_3763 arsenate reductase and related; PFAM: Arsenate reductase-like; SPTR: Arsenate reductase and related; TIGRFAM: Conserved hypothetical protein, ArsC related; IMG reference gene:2504769995; PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family.
       0.648
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.512
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
     
 0.497
AEE50594.1
KEGG: cpi:Cpin_6967 DNA-directed RNA polymerase, omega subunit; SPTR: DNA-directed RNA polymerase, omega subunit; IMG reference gene:2504772097; PFAM: RNA polymerase Rpb6.
     
  0.494
AEE51863.1
COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866:IPR002314:IPR002317; KEGG: coc:Coch_0734 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine--tRNA ligase; SPTR: Serine--tRNA ligase; TIGRFAM: Seryl-tRNA synthetase, class IIa; IMG reference gene:2504773400; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase.
    
   0.482
AEE48547.1
YceI family protein; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: sli:Slin_1870 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YceI family protein; IMG reference gene:2504769994; PFAM: YceI-like domain; Belongs to the UPF0312 family.
       0.447
AEE47992.1
KEGG: chu:CHU_3120 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769429.
   
 0.439
AEE48141.1
Peptidase C14 caspase catalytic subunit p20; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680:IPR019781:IPR011600; KEGG: cni:Calni_0859 WD40 repeat, subgroup; PFAM: Peptidase C14, caspase catalytic; WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: WD40 repeat, subgroup; IMG reference gene:2504769580; PFAM: Caspase domain; WD domain, G-beta repeat.
   
 0.439
AEE49070.1
WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781:IPR001680; KEGG: chu:CHU_1024 hypothetical protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: Possible membrane protein; IMG reference gene:2504770533; PFAM: WD domain, G-beta repeat.
   
 0.439
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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