Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE48560.1TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: lby:Lbys_2779 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Membrane protein; IMG reference gene:2504770008; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family. (1048 aa)    
Predicted Functional Partners:
AEE48559.1
InterPro IPR012944; KEGG: lby:Lbys_2780 ragb/susd domain protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein probably involved in nutrient binding; IMG reference gene:2504770007; PFAM: SusD family.
 
 
   0.945
AEE48255.1
InterPro IPR012944; KEGG: dfe:Dfer_4947 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504769698; PFAM: SusD family.
  
 
   0.795
AEE51366.1
InterPro IPR012944; KEGG: sli:Slin_2992 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772892; PFAM: SusD family.
  
 
   0.773
AEE49406.1
RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: fbc:FB2170_08154 putative outer membrane protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein; IMG reference gene:2504770875; PFAM: SusD family.
 
     0.694
AEE53693.1
InterPro IPR012944; KEGG: sli:Slin_0440 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504775268; PFAM: SusD family.
 
 
   0.668
AEE53695.1
InterPro IPR012944; KEGG: dfe:Dfer_4183 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504775270; PFAM: SusD family.
 
 
   0.651
AEE52499.1
InterPro IPR012944; KEGG: dfe:Dfer_1619 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774056; PFAM: SusD family.
 
 
   0.573
AEE51426.1
InterPro IPR012944; KEGG: sli:Slin_2453 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772953; PFAM: SusD family.
 
 
   0.559
AEE50991.1
InterPro IPR012944; KEGG: phe:Phep_2892 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772509; PFAM: SusD family.
 
 
   0.553
AEE52655.1
InterPro IPR012944; KEGG: sli:Slin_5654 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774216; PFAM: SusD family.
 
 
   0.536
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.