Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48623.1KEGG: sus:Acid_2913 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770073. (386 aa)    
Predicted Functional Partners:
AEE48621.1
KEGG: rbi:RB2501_01046 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770071.
 
    0.777
AEE48618.1
KEGG: mtt:Ftrac_3172 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770068.
 
    0.744
AEE48622.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: mtt:Ftrac_3175 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator; IMG reference gene:2504770072; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
 
     0.720
AEE48619.1
KEGG: mtt:Ftrac_3171 flavodoxin, putative; SPTR: Flavodoxin, putative; IMG reference gene:2504770069.
 
   
 0.633
AEE48451.1
Cupin 2 conserved barrel domain protein; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: dfe:Dfer_0768 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein; IMG reference gene:2504769897; PFAM: Cupin domain.
 
    0.618
AEE48620.1
COGs: COG2272 Carboxylesterase type B; InterPro IPR002018; KEGG: rbi:RB2501_01061 putative esterase; PFAM: Carboxylesterase, type B; SPTR: Putative esterase; IMG reference gene:2504770070; PFAM: Carboxylesterase; Belongs to the type-B carboxylesterase/lipase family.
 
    0.515
AEE52604.1
UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: cpi:Cpin_1021 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase; IMG reference gene:2504774162; PFAM: UvrD/REP helicase.
  
     0.422
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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