Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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AEE48636.1Demethylmenaquinone methyltransferase-like protein; COGs: COG0684 Demethylmenaquinone methyltransferase; KEGG: sli:Slin_6067 demethylmenaquinone methyltransferase-like protein; SPTR: Demethylmenaquinone methyltransferase-like protein; IMG reference gene:2504770086; PFAM: Demethylmenaquinone methyltransferase. (321 aa)    
Predicted Functional Partners:
AEE51553.1
Mandelate racemase/muconate lactonizing protein; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR006311:IPR013341:IPR013342; KEGG: dfe:Dfer_1106 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Mandelate racemase/muconate lactonizing protein; IMG reference gene:2504773082; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: Tat (twin-arginine tr [...]
 
    0.770
AEE49367.1
KEGG: sli:Slin_4811 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770834.
  
     0.752
AEE49366.1
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: sli:Slin_4810 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; IMG reference gene:2504770833; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
  
     0.742
AEE48631.1
Galactonate dehydratase; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342:IPR006311; KEGG: sli:Slin_6193 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; PRIAM: Galactonate dehydratase; SPTR: Mandelate racemase/muconate lactonizing protein; IMG reference gene:2504770081; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain.
 
    0.727
AEE48630.1
KEGG: sli:Slin_4811 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770080.
  
     0.697
AEE48629.1
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1103 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor; IMG reference gene:2504770079; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
  
     0.687
AEE51554.1
Bile acid:sodium symporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: dfe:Dfer_2456 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter; IMG reference gene:2504773083; PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter.
 
     0.647
AEE48635.1
KEGG: ppn:Palpr_1422 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770085.
       0.639
AEE48639.1
InterPro IPR013096; KEGG: sjp:SJA_C2-01010 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein; IMG reference gene:2504770089; PFAM: Cupin domain.
 
     0.629
AEE52655.1
InterPro IPR012944; KEGG: sli:Slin_5654 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774216; PFAM: SusD family.
  
    0.546
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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