Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE48642.1COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: dfe:Dfer_4420 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein; IMG reference gene:2504770092; PFAM: PIN domain. (126 aa)    
Predicted Functional Partners:
AEE48641.1
SPTR: Putative uncharacterized protein; IMG reference gene:2504770091.
       0.773
AEE50347.1
Hypothetical protein; COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: mar:MAE_04270 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771843; PFAM: Domain of unknown function (DUF3368).
  
     0.730
vapC
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.714
vapC-2
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.682
AEE48396.1
Protein of unknown function DUF132; InterPro IPR002850:IPR006596; KEGG: sli:Slin_2417 hypothetical protein; SMART: Nucleotide binding protein, PINc; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF132; IMG reference gene:2504769842; PFAM: PIN domain; TIGRFAM: putative toxin-antitoxin system toxin component, PIN family.
  
     0.675
AEE51444.1
Protein of unknown function DUF132; InterPro IPR006596:IPR002850:IPR002716; KEGG: fsu:Fisuc_0956 PilT protein domain protein; PFAM: PilT protein, N-terminal; SMART: Nucleotide binding protein, PINc; SPTR: Nucleic acid-binding protein, contains PIN domain; TIGRFAM: Protein of unknown function DUF132; IMG reference gene:2504772971; PFAM: PIN domain; TIGRFAM: putative toxin-antitoxin system toxin component, PIN family.
  
     0.650
AEE48627.1
Protein of unknown function UPF0175; InterPro IPR005368; KEGG: ana:asl2805 hypothetical protein; PFAM: Uncharacterised protein family UPF0175; SPTR: Putative uncharacterized protein; IMG reference gene:2504770077; PFAM: Uncharacterised protein family (UPF0175).
  
     0.645
AEE52786.1
Protein of unknown function DUF132; InterPro IPR006596:IPR002850; KEGG: fsu:Fisuc_0956 PilT protein domain protein; SMART: Nucleotide binding protein, PINc; SPTR: Nucleic acid-binding protein, contains PIN domain; TIGRFAM: Protein of unknown function DUF132; IMG reference gene:2504774353; TIGRFAM: putative toxin-antitoxin system toxin component, PIN family.
  
     0.599
AEE52560.1
KEGG: sli:Slin_4968 protein of unknown function DUF820; SPTR: Putative uncharacterized protein; IMG reference gene:2504774118; PFAM: Protein of unknown function (DUF820).
  
     0.597
AEE49910.1
InterPro IPR002716; KEGG: mhu:Mhun_1663 PilT protein-like; PFAM: PilT protein, N-terminal; SPTR: PilT protein-like; IMG reference gene:2504771392; PFAM: PIN domain.
  
     0.535
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.