Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48646.1TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: sli:Slin_3420 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; IMG reference gene:2504770096; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family. (1068 aa)    
Predicted Functional Partners:
AEE48645.1
InterPro IPR012944; KEGG: sli:Slin_3419 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504770095; PFAM: SusD family.
 
     0.921
AEE51509.1
RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: bth:BT_2460 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein; IMG reference gene:2504773038; PFAM: SusD family.
  
     0.712
AEE51575.1
InterPro IPR012944; KEGG: dfe:Dfer_2603 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504773104; PFAM: SusD family.
  
     0.706
AEE52499.1
InterPro IPR012944; KEGG: dfe:Dfer_1619 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774056; PFAM: SusD family.
  
     0.697
AEE51577.1
KEGG: sli:Slin_2415 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773106.
  
     0.653
AEE52464.1
InterPro IPR012944; KEGG: sli:Slin_0022 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774020; PFAM: SusD family.
  
     0.653
AEE53842.1
KEGG: dfe:Dfer_4310 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775421.
  
     0.607
AEE52636.1
InterPro IPR012944; KEGG: cpi:Cpin_0455 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774196; PFAM: SusD family.
  
     0.602
AEE49017.1
InterPro IPR012944; KEGG: sli:Slin_6054 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504770480; PFAM: SusD family.
  
     0.573
AEE51578.1
SSS sodium solute transporter superfamily; COGs: COG0591 Na+/proline symporter; InterPro IPR019900:IPR001734; KEGG: dfe:Dfer_2608 SSS sodium solute transporter superfamily; PFAM: Sodium/solute symporter; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; IMG reference gene:2504773107; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.568
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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