Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE48647.1InterPro IPR002860; KEGG: sli:Slin_4900 glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR repeat; SPTR: Glycosyl hydrolase BNR repeat-containing protein; IMG reference gene:2504770097; PFAM: BNR/Asp-box repeat. (1032 aa)    
Predicted Functional Partners:
AEE52945.1
PepSY-associated TM helix domain protein; InterPro IPR005625; KEGG: ran:Riean_1759 DNA mismatch repair protein; PFAM: PepSY-associated TM helix; SPTR: Putative uncharacterized protein; IMG reference gene:2504774517.
  
     0.630
AEE53855.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_2845 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; IMG reference gene:2504775434; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.597
AEE48648.1
Sulphatase-modifying factor protein; InterPro IPR005532; KEGG: slt:Slit_1352 protein of unknown function DUF323; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein; IMG reference gene:2504770098; PFAM: Formylglycine-generating sulfatase enzyme.
       0.559
AEE48649.1
LemA family protein; InterPro IPR007156; PFAM: LemA; IMG reference gene:2504770099; PFAM: LemA family.
       0.416
AEE48646.1
TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: sli:Slin_3420 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; IMG reference gene:2504770096; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
       0.408
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.