Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE48668.1KEGG: fbc:FB2170_14273 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770120. (174 aa)    
Predicted Functional Partners:
AEE48667.1
KEGG: mxa:MXAN_3141 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770119.
       0.773
AEE48666.1
InterPro IPR018060; KEGG: vvy:VV1562 AraC-type DNA-binding domain-containing protein; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; IMG reference gene:2504770118.
       0.623
AEE53267.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: hba:Hbal_1786 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Putative uncharacterized protein; IMG reference gene:2504774840; PFAM: Glycosyl transferases group 1.
  
     0.602
AEE48669.1
Hypothetical protein; IMG reference gene:2504770121.
       0.601
AEE53159.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774732.
  
     0.573
AEE49606.1
KEGG: cpi:Cpin_5732 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771078.
  
     0.535
AEE50917.1
Hypothetical protein; InterPro IPR005242; KEGG: aas:Aasi_0622 hypothetical protein; SPTR: Membrane protein, putative; IMG reference gene:2504772433; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
  
     0.426
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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