STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE48681.1Alpha-N-acetylgalactosaminidase; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: phe:Phep_1286 alpha-N-acetylgalactosaminidase; PFAM: Oxidoreductase, N-terminal; PRIAM: Alpha-N-acetylgalactosaminidase; SPTR: Alpha-N-acetylgalactosaminidase; IMG reference gene:2504770133; PFAM: Oxidoreductase family, NAD-binding Rossmann fold. (481 aa)    
Predicted Functional Partners:
AEE53806.1
Beta-N-acetylhexosaminidase; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015883; KEGG: sen:SACE_3851 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Beta-N-acetylhexosaminidase; IMG reference gene:2504775384; PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2.
  
    0.529
AEE50026.1
COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933:IPR000421; KEGG: sli:Slin_0308 alpha-L-fucosidase; PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 29; PRIAM: Alpha-L-fucosidase; SMART: Glycoside hydrolase, family 29; SPTR: Alpha-L-fucosidase; IMG reference gene:2504771508; PFAM: Alpha-L-fucosidase.
  
     0.501
AEE54362.1
Glycoside hydrolase, family 20, catalytic core; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015883; KEGG: sli:Slin_2031 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; SPTR: Beta-N-acetylhexosaminidase; IMG reference gene:2504775955; PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2.
  
    0.483
AEE51150.1
COGs: COG4409 Neuraminidase (sialidase); KEGG: phe:Phep_3253 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein; IMG reference gene:2504772671; PFAM: BNR/Asp-box repeat.
  
     0.474
AEE50877.1
InterPro IPR002575; KEGG: amu:Amuc_2100 aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SPTR: Aminoglycoside phosphotransferase; IMG reference gene:2504772388; PFAM: Phosphotransferase enzyme family.
 
     0.457
AEE54084.1
KEGG: dfe:Dfer_1563 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775671.
  
    0.441
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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