Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48697.1Integrase family protein; InterPro IPR002104; KEGG: sli:Slin_5872 integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Putative uncharacterized protein; IMG reference gene:2504770150; PFAM: Phage integrase family; Belongs to the 'phage' integrase family. (425 aa)    
Predicted Functional Partners:
AEE48698.1
Hypothetical protein; IMG reference gene:2504770151.
       0.701
AEE48699.1
Hypothetical protein; IMG reference gene:2504770152.
       0.604
AEE48700.1
Hypothetical protein; IMG reference gene:2504770153.
       0.481
AEE51802.1
COGs: COG1040 amidophosphoribosyltransferase; KEGG: phe:Phep_3856 phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; IMG reference gene:2504773339; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.
   
    0.458
AEE48696.1
KEGG: dfe:Dfer_1168 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770149.
       0.457
AEE48533.1
COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: cpi:Cpin_1939 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; PRIAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; IMG reference gene:2504769980; PFAM: Prephenate dehydrogenase.
  
    0.433
AEE50863.1
Protein of unknown function DUF159; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: mxa:MXAN_5161 hypothetical protein; PFAM: Protein of unknown function DUF159; SPTR: Putative uncharacterized protein; IMG reference gene:2504772374; PFAM: Uncharacterised ACR, COG2135; Belongs to the SOS response-associated peptidase family.
   
    0.415
rpsU
HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: coc:Coch_0829 30S ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; IMG reference gene:2504771891; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
 
 
 
 0.402
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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