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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE48710.1KEGG: chu:CHU_1567 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770163. (360 aa)    
Predicted Functional Partners:
AEE50098.1
KEGG: mtt:Ftrac_3437 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771583; PFAM: Peptidase family C25.
 
     0.788
AEE50219.1
KEGG: cat:CA2559_01755 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771710.
  
     0.774
AEE50469.1
COGs: COG0729 Outer membrane protein; KEGG: chu:CHU_0166 outer membrane protein; SPTR: Outer membrane protein, OMP85 family, putative; IMG reference gene:2504771971.
  
     0.774
AEE50554.1
KEGG: fjo:Fjoh_1483 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772057.
  
     0.729
AEE52630.1
KEGG: fjo:Fjoh_1556 hypothetical protein; SPTR: Fjo24; IMG reference gene:2504774190; PFAM: Peptidase family C25.
 
     0.702
AEE49607.1
KEGG: cat:CA2559_10793 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771079.
  
     0.646
AEE49728.1
TonB-dependent receptor; InterPro IPR012910:IPR000531; KEGG: ppn:Palpr_1066 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; IMG reference gene:2504771204; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.636
AEE50487.1
KEGG: spu:761802 hypothetical protein LOC761802; SPTR: Putative uncharacterized protein; IMG reference gene:2504771989.
  
     0.632
AEE51227.1
KEGG: fjo:Fjoh_2755 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772749.
  
     0.632
AEE51819.1
InterPro IPR000297; KEGG: ppn:Palpr_1883 ppic-type peptidyL-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; IMG reference gene:2504773356; PFAM: PPIC-type PPIASE domain.
  
     0.623
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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