Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE48729.1SPTR: Lipoprotein, putative; IMG reference gene:2504770182. (118 aa)    
Predicted Functional Partners:
AEE48730.1
MscS Mechanosensitive ion channel; InterPro IPR006685; KEGG: coc:Coch_0787 hypothetical protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Small-conductance mechanosensitive channel; IMG reference gene:2504770183; PFAM: Mechanosensitive ion channel.
       0.773
AEE48731.1
SPTR: Putative uncharacterized protein; IMG reference gene:2504770184.
       0.701
AEE48732.1
Domain of unknown function DUF1905; InterPro IPR015018; KEGG: mtt:Ftrac_1218 hypothetical protein; PFAM: Protein of unknown function DUF1905; SPTR: Putative uncharacterized protein; IMG reference gene:2504770185; PFAM: Domain of unknown function (DUF1905).
       0.611
AEE48726.1
SPTR: Putative uncharacterized protein; IMG reference gene:2504770179.
       0.499
AEE48727.1
KEGG: mtt:Ftrac_2119 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770180; PFAM: MerC mercury resistance protein.
       0.499
AEE48728.1
Hypothetical protein; IMG reference gene:2504770181.
       0.499
AEE48724.1
SPTR: Lipoprotein, putative; IMG reference gene:2504770177.
      
0.458
AEE48725.1
MscS Mechanosensitive ion channel; InterPro IPR006685; KEGG: coc:Coch_0787 hypothetical protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Small-conductance mechanosensitive channel; IMG reference gene:2504770178; PFAM: Mechanosensitive ion channel.
       0.458
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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