Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
rlmFrRNA (adenine-N(6)-)-methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA. (566 aa)    
Predicted Functional Partners:
AEE48781.1
KEGG: gfo:GFO_0067 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770237.
       0.529
AEE48779.1
ATP-grasp fold domain protein, DUF201-type; InterPro IPR003806; KEGG: tra:Trad_0672 hypothetical protein; PFAM: ATP-grasp fold, DUF201-type; SPTR: Putative uncharacterized protein; IMG reference gene:2504770235; PFAM: ATP-grasp domain.
       0.509
AEE53521.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775096.
  
     0.488
AEE51629.1
Protein of unknown function DUF2132; COGs: COG4628 conserved hypothetical protein; InterPro IPR018668; KEGG: scl:sce6800 hypothetical protein; PFAM: Protein of unknown function DUF2132; SPTR: Putative uncharacterized protein; IMG reference gene:2504773161; PFAM: Uncharacterized conserved protein (DUF2132).
 
     0.442
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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