Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE48781.1KEGG: gfo:GFO_0067 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770237. (123 aa)    
Predicted Functional Partners:
rlmF
rRNA (adenine-N(6)-)-methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.
       0.529
AEE48782.1
Hypothetical protein; IMG reference gene:2504770238.
       0.410
AEE48335.1
KEGG: zpr:ZPR_0967 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769780.
  
     0.408
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.