Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48787.1KEGG: oih:OB0936 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770243. (429 aa)    
Predicted Functional Partners:
AEE48786.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: swd:Swoo_1190 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: AraC family transcriptional regulator; IMG reference gene:2504770242; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
       0.559
AEE48785.1
KEGG: ppn:Palpr_0658 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770241.
       0.532
AEE48838.1
KEGG: coc:Coch_1825 membrane protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770297.
  
     0.460
AEE52262.1
Protein of unknown function DUF418; COGs: COG2311 membrane protein; InterPro IPR007299:IPR007349; KEGG: mtt:Ftrac_0264 hypothetical protein; PFAM: Protein of unknown function DUF418; Protein of unknown function DUF405; SPTR: Membrane protein; IMG reference gene:2504773807; PFAM: Protein of unknown function (DUF418).
  
     0.418
AEE48783.1
Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR011659:IPR006680; KEGG: fbc:FB2170_14083 hypothetical protein; PFAM: Amidohydrolase 1; WD40-like Beta Propeller; SPTR: WD40-like repeat/amidohydrolase domain protein; IMG reference gene:2504770239; PFAM: WD40-like Beta Propeller Repeat; Amidohydrolase family.
 
     0.403
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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