Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
AEE48791.1KEGG: ran:Riean_1738 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770247. (172 aa)    
Predicted Functional Partners:
AEE49541.1
Ethyl tert-butyl ether degradation EthD; InterPro IPR009799; KEGG: pca:Pcar_0984 hypothetical protein; PFAM: Ethyl tert-butyl ether degradation EthD; SPTR: Ethyl tert-butyl ether degradation EthD; TIGRFAM: Ethyl tert-butyl ether degradation EthD; IMG reference gene:2504771013; PFAM: EthD protein; TIGRFAM: conserved hypothetical protein.
  
     0.549
AEE50316.1
KEGG: fba:FIC_00256 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771811.
  
     0.407
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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